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Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs2442035 chr2:61679086 G/A C2orf74 chr2:61372203-61391964:+ 0.6 6.42 4.22E-8 Box Plot
ACC rs2457018 chr9:32166137 A/G SMU1 chr9:33041762-33076657:- 1.26 6.02 1.8E-7 Box Plot
ACC rs2475787 chr6:86415236 T/C SNHG5 chr6:86370668-86388454:- 0.64 5.62 7.71E-7 Box Plot
ACC rs2475788 chr6:86416901 A/G SNHG5 chr6:86370668-86388454:- 0.64 5.62 7.71E-7 Box Plot
ACC rs2475792 chr6:86392102 C/T SNHG5 chr6:86370668-86388454:- 0.7 6.75 1.24E-8 Box Plot
ACC rs2484356 chr6:86406280 T/G SNHG5 chr6:86370668-86388454:- 0.68 6.09 1.38E-7 Box Plot
ACC rs251343 chr5:96257829 C/T ERAP2 chr5:96211643-96255420:+ 0.98 12.02 1.24E-16 Box Plot
ACC rs251344 chr5:96258927 G/C ERAP2 chr5:96211643-96255420:+ 0.86 9.07 2.73E-12 Box Plot
ACC rs2516829 chr2:99773201 T/G TSGA10 chr2:99613724-99771427:- 0.55 5.21 3.3E-6 Box Plot
ACC rs2516830 chr2:99773702 T/G TSGA10 chr2:99613724-99771427:- 0.58 5.79 4.09E-7 Box Plot
ACC rs2516833 chr2:99777405 T/C TSGA10 chr2:99613724-99771427:- 0.58 5.79 4.09E-7 Box Plot
ACC rs2516834 chr2:99771533 C/T TSGA10 chr2:99613724-99771427:- 0.56 5.5 1.15E-6 Box Plot
ACC rs2516835 chr2:99779131 T/C TSGA10 chr2:99613724-99771427:- 0.58 5.79 4.09E-7 Box Plot
ACC rs2528108 chr7:76335814 C/T POMZP3 chr7:76239303-76256578:- 1.1 5.83 3.57E-7 Box Plot
ACC rs252889 chr5:56227069 C/A C5orf35 chr5:56205103-56213010:+ 0.91 5.37 1.84E-6 Box Plot